Summary of 329-Nelson-Chemotaxis

SSBD:database
SSBD:database URL
Title
Ammonium chemotaxis of Chlamydomonas reinhardtii
Description
-
Release date
2025-01-31
Updated date
-
License
CC BY
Kind
Image data based on Experiment
Number of Datasets
33 ( Image datasets: 33, Quantitative data datasets: 0 )
Size of Datasets
463.9 MB ( Image datasets: 463.9 MB, Quantitative data datasets: 0 bytes )

Organism(s)
Chlamydomonas reinhardtii
Strain(s)
CC-613, CC-4042, CC-125, CC-1036, CC-124, CC-125, CC-4316, CC-124, CC-2894

Datatype
-
Molecular Function (MF)
Biological Process (BP)
cell chemotaxis
Cellular Component (CC)
Biological Imaging Method
microscopy, macroscopy
X scale
-
Y scale
-
Z scale
-
T scale
5 minutes, 2 seconds, NA

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Related paper(s)

Gabela Nelson, Alexis Strain, Atsuko Isu, Alireza Rahnama, Ken-Ichi Wakabayashi, Adam T Melvin, Naohiro Kato (2023) Cells collectively migrate during ammonium chemotaxis in Chlamydomonas reinhardtii., Scientific reports, Volume 13, Number 1, pp. 10781

Published in 2023 Jul 4 (Electronic publication in July 4, 2023, midnight )

(Abstract) The mechanisms governing chemotaxis in Chlamydomonas reinhardtii are largely unknown compared to those regulating phototaxis despite equal importance on the migratory response in the ciliated microalga. To study chemotaxis, we made a simple modification to a conventional Petri dish assay. Using the assay, a novel mechanism governing Chlamydomonas ammonium chemotaxis was revealed. First, we found that light exposure enhances the chemotactic response of wild-type Chlamydomonas strains, yet phototaxis-incompetent mutant strains, eye3-2 and ptx1, exhibit normal chemotaxis. This suggests that Chlamydomonas transduces the light signal pathway in chemotaxis differently from that in phototaxis. Second, we found that Chlamydomonas collectively migrate during chemotaxis but not phototaxis. Collective migration during chemotaxis is not clearly observed when the assay is conducted in the dark. Third, the Chlamydomonas strain CC-124 carrying agg1(-), the AGGREGATE1 gene (AGG1) null mutation, exhibited a more robust collective migratory response than strains carrying the wild-type AGG1 gene. The expression of a recombinant AGG1 protein in the CC-124 strain suppressed this collective migration during chemotaxis. Altogether, these findings suggest a unique mechanism; ammonium chemotaxis in Chlamydomonas is mainly driven by collective cell migration. Furthermore, it is proposed that collective migration is enhanced by light and suppressed by the AGG1 protein.

Contact
Naohiro Kato , Louisiana State University , Department of Biological Sciences , Department of Biological Sciences
Contributors
Gabela Nelson, Alexis Strain


Dataset List of 329-Nelson-Chemotaxis

#
Dataset ID
Kind
Size
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# 11999
Datast ID Fig1A_chemotaxis_1
Dataset Kind Image data
Dataset Size 9.9 MB
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# 12000
Datast ID Fig1A_chemotaxis_2
Dataset Kind Image data
Dataset Size 13.7 MB
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# 12001
Datast ID Fig1A_chemotaxis_3
Dataset Kind Image data
Dataset Size 12.1 MB
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SSBD:OMERO
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# 12002
Datast ID MovieS1_chemotaxis
Dataset Kind Image data
Dataset Size 993.5 KB
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SSBD:OMERO
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# 12003
Dataset Kind Image data
Dataset Size 22.2 MB
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SSBD:OMERO
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# 12004
Dataset Kind Image data
Dataset Size 25.1 MB
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SSBD:OMERO
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# 12005
Dataset Kind Image data
Dataset Size 22.4 MB
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SSBD:OMERO
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# 12006
Dataset Kind Image data
Dataset Size 15.5 MB
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SSBD:OMERO
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# 12007
Dataset Kind Image data
Dataset Size 15.5 MB
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SSBD:OMERO
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# 12008
Dataset Kind Image data
Dataset Size 15.1 MB
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SSBD:OMERO
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# 12009
Dataset Kind Image data
Dataset Size 16.9 MB
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SSBD:OMERO
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# 12010
Dataset Kind Image data
Dataset Size 15.4 MB
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SSBD:OMERO
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# 12011
Dataset Kind Image data
Dataset Size 18.3 MB
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SSBD:OMERO
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# 12012
Dataset Kind Image data
Dataset Size 13.2 MB
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SSBD:OMERO
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# 12013
Dataset Kind Image data
Dataset Size 12.2 MB
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SSBD:OMERO
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# 12014
Dataset Kind Image data
Dataset Size 11.5 MB
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SSBD:OMERO
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# 12015
Dataset Kind Image data
Dataset Size 13.1 MB
4D view
SSBD:OMERO
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# 12016
Dataset Kind Image data
Dataset Size 10.2 MB
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SSBD:OMERO
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# 12017
Dataset Kind Image data
Dataset Size 10.5 MB
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SSBD:OMERO
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# 12018
Dataset Kind Image data
Dataset Size 19.9 MB
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SSBD:OMERO
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# 12019
Dataset Kind Image data
Dataset Size 18.8 MB
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SSBD:OMERO
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# 12020
Dataset Kind Image data
Dataset Size 19.6 MB
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SSBD:OMERO
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# 12021
Dataset Kind Image data
Dataset Size 13.1 MB
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SSBD:OMERO
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# 12022
Dataset Kind Image data
Dataset Size 10.2 MB
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SSBD:OMERO
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# 12023
Dataset Kind Image data
Dataset Size 10.5 MB
4D view
SSBD:OMERO
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# 12024
Datast ID MovieS2_migrate
Dataset Kind Image data
Dataset Size 9.8 MB
4D view
SSBD:OMERO
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# 12025
Dataset Kind Image data
Dataset Size 12.5 MB
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SSBD:OMERO
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# 12026
Dataset Kind Image data
Dataset Size 11.0 MB
4D view
SSBD:OMERO
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# 12027
Dataset Kind Image data
Dataset Size 12.7 MB
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SSBD:OMERO
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# 12028
Dataset Kind Image data
Dataset Size 16.0 MB
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SSBD:OMERO
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# 12029
Dataset Kind Image data
Dataset Size 17.0 MB
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SSBD:OMERO
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# 12030
Dataset Kind Image data
Dataset Size 16.3 MB
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SSBD:OMERO
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# 12031
Datast ID MovieS3_transgenic
Dataset Kind Image data
Dataset Size 2.5 MB
4D view
SSBD:OMERO
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