Summary of ssbd-repos-000378

SSBD:database
URL

Name
ssbd-repos-000378 (378-Minegishi-MetastaticNiche)
URL
DOI
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Title
Fluorescent labeling of cell-cell interaction using sGRAPHIC
Description
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Submited Date
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Release Date
2024-12-23
Updated Date
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License
Funding information
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File formats
Data size
1.2 GB

Organism
Mus musculus
Strain
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Cell Line
EO771, NIH-3T3 cell, MC-38 cell, NIH-3T3 cell, MC-38 cell, AML12 cell
Genes
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Proteins
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GO Molecular Function (MF)
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GO Biological Process (BP)
cell-cell interaction
GO Cellular Component (CC)
cell-cell contact zone
Study Type
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Imaging Methods
confocal microscopy, time lapse microscopy

Method Summary
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Related paper(s)

Misa Minegishi, Takahiro Kuchimaru, Kaori Nishikawa, Takayuki Isagawa, Satoshi Iwano, Kei Iida, Hiromasa Hara, Shizuka Miura, Marika Sato, Shigeaki Watanabe, Akifumi Shiomi, Yo Mabuchi, Hiroshi Hamana, Hiroyuki Kishi, Tatsuyuki Sato, Daigo Sawaki, Shigeru Sato, Yutaka Hanazono, Atsushi Suzuki, Takahide Kohro, Tetsuya Kadonosono, Tomomi Shimogori, Atsushi Miyawaki, Norihiko Takeda, Hirofumi Shintaku, Shinae Kizaka-Kondoh, Satoshi Nishimura (2023) Secretory GFP reconstitution labeling of neighboring cells interrogates cell-cell interactions in metastatic niches., Nature communications, Volume 14, Number 1, pp. 8031

Published in 2023 Dec 5 (Electronic publication in Dec. 5, 2023, midnight )

(Abstract) Cancer cells inevitably interact with neighboring host tissue-resident cells during the process of metastatic colonization, establishing a metastatic niche to fuel their survival, growth, and invasion. However, the underlying mechanisms in the metastatic niche are yet to be fully elucidated owing to the lack of methodologies for comprehensively studying the mechanisms of cell-cell interactions in the niche. Here, we improve a split green fluorescent protein (GFP)-based genetically encoded system to develop secretory glycosylphosphatidylinositol-anchored reconstitution-activated proteins to highlight intercellular connections (sGRAPHIC) for efficient fluorescent labeling of tissue-resident cells that neighbor on and putatively interact with cancer cells in deep tissues. The sGRAPHIC system enables the isolation of metastatic niche-associated tissue-resident cells for their characterization using a single-cell RNA sequencing platform. We use this sGRAPHIC-leveraged transcriptomic platform to uncover gene expression patterns in metastatic niche-associated hepatocytes in a murine model of liver metastasis. Among the marker genes of metastatic niche-associated hepatocytes, we identify Lgals3, encoding galectin-3, as a potential pro-metastatic factor that accelerates metastatic growth and invasion.

Contact(s)
Takahiro Kuchimaru, Hirofumi Shintaku
Organization(s)
Jichi Medical University, RIKEN , Graduate School of Medicine, Cluster for Pioneering Research , Graduate School of Medicine, Cluster for Pioneering Research
Image Data Contributors
Quantitative Data Contributors

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