Detail of Fig4g_pre_stimulation_dark



Project
Title
Time-lapse images of organoids before single-cell ERK activation by 2P excitation.
Description
Time-lapse images of organoids before single-cell ERK activation by 2P excitation.
Release, Updated
2021-09-30
License
CC BY
Kind
Image data
File Formats
.oib
Data size
104.4 MB

Organism
Mus musculus ( NCBI:txid10090 )
Strain(s)
-
Cell Line
-
Protein names
ERK

Datatype
-
Molecular Function (MF)
extracellular signal-regulated kinase activity ( GO:0004707 )
Biological Process (BP)
-
Cellular Component (CC)
-
Biological Imaging Method
time lapse microscopy ( Fbbi:00000249 )
X scale
0.53 micrometer/pixel
Y scale
0.53 micrometer/pixel
Z scale
2 micrometer/slice
T scale
63.40 sec per time interval

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Summary of Methods
See details in Kinjo T, et. al. (2019) Nat Methods., 16(10):1029-1036.
Related paper(s)

Tomoaki Kinjo, Kenta Terai, Shoichiro Horita, Norimichi Nomura, Kenta Sumiyama, Kaori Togashi, So Iwata, Michiyuki Matsuda (2019) FRET-assisted photoactivation of flavoproteins for in vivo two-photon optogenetics., Nature methods, Volume 16, Number 10, pp. 1029-1036

Published in 2019 Oct (Electronic publication in Sept. 9, 2019, midnight )

(Abstract) Optical dimerizers have been developed to untangle signaling pathways, but they are of limited use in vivo, partly due to their inefficient activation under two-photon (2P) excitation. To overcome this problem, we developed Forster resonance energy transfer (FRET)-assisted photoactivation, or FRAPA. On 2P excitation, mTagBFP2 efficiently absorbs and transfers the energy to the chromophore of CRY2. Based on structure-guided engineering, a chimeric protein with 40% FRET efficiency was developed and named 2P-activatable CRY2, or 2paCRY2. 2paCRY2 was employed to develop a RAF1 activation system named 2paRAF. In three-dimensionally cultured cells expressing 2paRAF, extracellular signal-regulated kinase (ERK) was efficiently activated by 2P excitation at single-cell resolution. Photoactivation of ERK was also accomplished in the epidermal cells of 2paRAF-expressing mice. We further developed an mTFP1-fused LOV domain that exhibits efficient response to 2P excitation. Collectively, FRAPA will pave the way to single-cell optical control of signaling pathways in vivo.
(MeSH Terms)

Contact
Michiyuki Matsuda, Kenta Terai , Graduate School of Biostudies, Kyoto University, Graduate School of Biostudies, Kyoto University , Research Center for Dynamic Living Systems, Research Center for Dynamic Living Systems , Laboratory of Bioimaging and Cell Signaling, Laboratory of Bioimaging and Cell Signaling
Contributors

OMERO Dataset
OMERO Project
Source