Detail of Fig1C_zygote_PM



Project
Title
Time lapse images of the zygote after fertilization of the egg cell by the sperm cell, both of which expressed a plasma membrane marker.
Description
Time lapse images of the zygote after fertilization of the egg cell by the sperm cell, both of which expressed a plasma membrane (PM) marker. Channel1 is the images of a PM marker for male sperm cell, and channel2 is the images of a PM marker for female egg cell.
Release, Updated
2024-11-25
License
CC-BY
Kind
Image data
File Formats
.nd2
Data size
1003.3 MB

Organism
Arabidopsis thaliana ( NCBITaxon:3702 )
Strain(s)
-
Cell Line
-

Datatype
-
Molecular Function (MF)
Biological Process (BP)
zygote elongation ( GO:0080159 )
Cellular Component (CC)
plasma membrane ( GO:0005886 )
Biological Imaging Method
two-photon laser scanning microscopy ( Fbbi:00000254 )
time lapse microscopy ( Fbbi:00000249 )
X scale
0.154 micrometer/pixel
Y scale
0.154 micrometer/pixel
Z scale
1 micrometer/slice
T scale
15 minutes per time interval

Image Acquisition
Experiment type
-
Microscope type
-
Acquisition mode
-
Contrast method
-
Microscope model
-
Detector model
-
Objective model
-
Filter set
-

Summary of Methods
See details in Kang Z, et. al. Plant Cell Physiol. 2023 Dec 6;64(11):1279-1288.
Related paper(s)

Zichen Kang, Hikari Matsumoto, Tomonobu Nonoyama, Sakumi Nakagawa, Yukitaka Ishimoto, Satoru Tsugawa, Minako Ueda (2023) Coordinate Normalization of Live-Cell Imaging Data Reveals Growth Dynamics of the Arabidopsis Zygote., Plant & cell physiology

Published in 2023 Mar 20 (Electronic publication in March 20, 2023, midnight )

(Abstract) Polarization of the zygote defines the body axis during plant development. In Arabidopsis (Arabidopsis thaliana), the zygote becomes polarized and elongates in the longitudinal direction, ultimately forming the apical-basal axis of the mature plant. Despite its importance, the mechanism for this elongation remains poorly understood. Based on live-cell imaging of the zygote, we developed new image analysis methods, referred to as coordinate normalization, that appropriately fix and align positions in an image, preventing fluctuation across a temporal sequence of images. Using these methods, we discovered that the zygote elongates only at its apical tip region, similar to tip-growing cells such as pollen tubes and root hairs. We also investigated the spatiotemporal dynamics of the apical tip contour of the zygote and observed that the zygote tip retains its isotropic, hemispherical apical shape during cell elongation. By looking at the elliptical fitting of the contour over time, we further discovered that the apical cell tip becomes thinner at first and then thickens, with a transient increase in growth speed that is followed by the first cell division. We performed the same series of analyses using root hairs and established that the hemispherical tip shape and the changes in growth rate associated with changes in tip size are both specific to the zygote. In summary, the Arabidopsis zygote undergoes directional elongation as a tip-growing cell, but its tip retains an unusual isotropic shape, and the manner of growth changes with the developmental stage.

Contact
Satoru Tsugawa, Minako Ueda , Akita Prefectural University, Tohoku University , Department of Mechanical Engineering , Graduate School of Life Sciences
Contributors
Hikari Matsumoto Zichen Kang

OMERO Dataset
OMERO Project
Source